Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912081.1_cds_XP_016462099.1_55360
CDS Infomation

[gene=LOC107785336] [db_xref=GeneID:107785336] [protein=subtilisin-like protease SBT5.6] [partial=3'] [protein_id=XP_016462099.1] [location=join(3935..4217,4499..4675,4903..5014,5109..5673,5949..6046,6134..6473,6645..6858,6947..>7137)] [gbkey=CDS]
Sequence

ATGAAGAATCATAACTTTGTAGTTTTCTTTTTGCTCTTCCTCATGATATTCCTTAATGGT
TTTGTTTCATCTACTGAAGAAACCAAGGTTTATGTAGTGTACCTTGGCGAGCACAGTGGA
GAGAAGACTTTGAAAGAAATAGAAGATCACCACTGCTCATTTCTTCATTCTGTCAAGGCT
ACTTCCAAAGAGGAAGCTAAAACATCGCTAGTTCACAGCTACAAGAACGTCATCAATGGC
TTCTCTGCTTTGTTAACGCCACAAGAAGCCGATATGATATCAGGGATGGAAGGGGTAATA
TCAGTATTTCACAGTGATCCTCATGAAATAAAGCCTCATACTACAAGATCTTGGGACTTT
GTGAGCTTGATGGAAGGAACTTCACTCATAAATTCTGGACAAGATTTGTTGCAAAATGCT
AGTTATGGGAAGGATATCATTGTTGGGGTTATGGGCAGTGGGGTGTGGCCAGAATCTCCA
AGTTTCAATGATGAAGGAATGGAACCAGTTCCAAAGTCATGGAAAGGAATTTGCCAAGAA
GGTGTTGCCTTCAACTCCTCCCATTGCAACAGGAAATTAGTTGGAGCACGATATTATTTA
AAAAGTTACGAGGCAAATTTTGGTCCTCTTAACGAGACGAGGGACTTTCGTTCACCAAGA
GATGTAGATGGTCATGGTACTCACGCAGCAGCAACAGTAGGTGGTCGAAGAGTTGCCAAT
GCATCAGCAATTGGTGGATTTGCAAAAGGTACAGCAACAGGAGGTGCTCCAAATGTTCGC
CTTGCCATTTATAAAGTATGTTGGCCAGTTCCAGATCAGAGCTTAGCTGAGGGAAATACA
TGCCTCACAGATGATATTATTGCTGCTTTTGATGATGCTATAGCTGATGGAGTTGATGTA
CTCAGTGTCTCCTTTGGGTCTCAACCTAGAACAACATATTATACACAAAATGGTATTGCA
ATTGGATCTTTGCATGCTCTGAAGAGGAATATTGTAGTAGCCTGTAGTGCTGGAAATGAT
GGTCCAACACCATCTACTGTTGGAAATGTGGCTCCATGGATTATCACAGTTGGTGCTAGT
AGTATCGATCGTGTTTTTTCATCTCCAATTATGCTCGGAAATGGAATGATCGTCGAGGGG
CAAACAGTAACTCCAATAAGGAGGAGTAGGTTGCATCCTTTGGTTTATGCAGGAGATGTA
GAAATTAGAGGAACTACGGCAAGCAATACAACAGGACTATGTTTTCCTGGTACACTTTCA
AGAAATCTTGTAAGAGGAAAAGTTGTCGTCTGCAGGGGCAGTAGTATGCAGGCATCAATG
GAGGTGAAAAGAGCTGGAGGTGTTGCAGCTATTTTAGGAACTCCATTTAATGAGATACAA
GTCACCCCTTTTTTGGATTCCACAACAGTTGCTTTTTCATATGGCCTAAATACAATCCGA
ACATATATACAGACTGAAAAAAATCCAATGGCAACACTTCTCCCAGGGCAAACATTGATT
GGTACCAAGTCAGCACCAGTCATGGCTCCTTTCACTTCCAAAGGACCAAATATAGTCGAT
CCTAACATTCTCAAGCCGGATATAACTGCTCCTGGATTAAACATACTAGCCGCATGGAGT
GAAGCATCCTCTCCGTTGAACTTGCCAGAGGATCGTCGTGTCGTCAAGTATAATATGCAG
TCTGGGACATCCATGTCTTGCCCACATGTTTCAGCTGTAATTGCACTCTTAAAATCCATT
CATCCAGATTGGAGCAGTGCTGCAATCAGATCAGCTCTAATGACAACATCAACAATCAAT
AATTTGGTTGGTAGACCAATAACAAATGCCACTGGTAATGATGCAAACCCCTTTGAGTAC
GGAGCAGGCCATTTCCGACCATCAAGAGCAGTAGATCCTGGACTCATTTATGATGCAACG
TATGAGGATTATCTTCTCTATCTTTGTAGTCAAAACATAAGCCTAGATTCCTCGTTCAAT

Peptide Sequence

PEP ID

XP_016462099.1
PEP Infomation

PREDICTED: subtilisin-like protease SBT5.6, partial [Nicotiana tabacum]
Sequence

MKNHNFVVFFLLFLMIFLNGFVSSTEETKVYVVYLGEHSGEKTLKEIEDHHCSFLHSVKA
TSKEEAKTSLVHSYKNVINGFSALLTPQEADMISGMEGVISVFHSDPHEIKPHTTRSWDF
VSLMEGTSLINSGQDLLQNASYGKDIIVGVMGSGVWPESPSFNDEGMEPVPKSWKGICQE
GVAFNSSHCNRKLVGARYYLKSYEANFGPLNETRDFRSPRDVDGHGTHAAATVGGRRVAN
ASAIGGFAKGTATGGAPNVRLAIYKVCWPVPDQSLAEGNTCLTDDIIAAFDDAIADGVDV
LSVSFGSQPRTTYYTQNGIAIGSLHALKRNIVVACSAGNDGPTPSTVGNVAPWIITVGAS
SIDRVFSSPIMLGNGMIVEGQTVTPIRRSRLHPLVYAGDVEIRGTTASNTTGLCFPGTLS
RNLVRGKVVVCRGSSMQASMEVKRAGGVAAILGTPFNEIQVTPFLDSTTVAFSYGLNTIR
TYIQTEKNPMATLLPGQTLIGTKSAPVMAPFTSKGPNIVDPNILKPDITAPGLNILAAWS
EASSPLNLPEDRRVVKYNMQSGTSMSCPHVSAVIALLKSIHPDWSSAAIRSALMTTSTIN
NLVGRPITNATGNDANPFEYGAGHFRPSRAVDPGLIYDATYEDYLLYLCSQNISLDSSFN

Transcript Sequence

Gene sequence data has not been registered.